SPHINX

User documentation

New users are advised to first read the Quick Start guide, available in Microsoft Word or Adobe PDF formats.

Detailed user documentation is available for download in PDF format below. Alternatively, download all of the documentation (including "Quick Start" guide) as a zip archive (181 MB).

Administration

Administrator guide
Manage users

Study management

Create a new study
Update study details
Study components
Subject uploader (new subjects)
Subject uploader (updating subjects)
Subject custom field uploader (new subjects)
Subject custom field uploader (updating subjects)

Reports

Subject management

Search existing subjects
Add new subject
Study specific demographic data
Contact
File attachments
Consent
Correspondence
Clinical data
Biocollections/biospecimens
Biospecimen search

Pedigree

Phenotype management

Data dictionary definition
Data dictionary upload
Dataset definition

Phenotype data uploader

Laboratory Information Management System (LIMS)

Inventory
Collection custom fields
Biospecimen custom fields
Barcode labels

Biospecimen upload

Work tracking

Researcher management
Billable item types
Work requests

Billable items

Genomics

Micro Service
Data Centre
Computation

Analysis

 

 

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